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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2235602 chr20:44242565 G/T WFDC3 chr20:44376583-44420571:- 0.75 5.68 6.17E-7 Box Plot
ACC rs2239538 chr7:100798728 G/A AP1S1 chr7:100797678-100804877:+ 0.73 5.34 2.09E-6 Box Plot
ACC rs2242471 chr4:76878716 G/C NAAA chr4:76834810-76862204:- 0.51 5.2 3.39E-6 Box Plot
ACC rs2242473 chr4:76878956 G/A NAAA chr4:76834810-76862204:- 0.51 5.2 3.39E-6 Box Plot
ACC rs2242474 chr4:76878982 T/C NAAA chr4:76834810-76862204:- 0.51 5.2 3.39E-6 Box Plot
ACC rs2246577 chr17:80680394 T/C FN3KRP chr17:80674559-80688204:+ 0.68 6.35 5.41E-8 Box Plot
ACC rs2252662 chr2:61670731 T/C C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2256615 chr2:61679894 C/G C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2256617 chr2:61679924 A/G C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2264100 chr2:61670829 G/A C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2271951 chr19:49990843 A/G PTOV1 chr19:50353992-50364001:+ 0.61 5.07 5.35E-6 Box Plot
ACC rs2271953 chr19:49990666 A/C PTOV1 chr19:50353992-50364001:+ 0.61 5.07 5.35E-6 Box Plot
ACC rs2273 chr4:76889388 C/T NAAA chr4:76834810-76862204:- 0.52 5.3 2.4E-6 Box Plot
ACC rs2274514 chr6:42934500 C/T PEX6 chr6:42931608-42946958:- 0.59 5.54 1.02E-6 Box Plot
ACC rs2278019 chr5:96225252 A/G ERAP2 chr5:96211643-96255420:+ 0.88 8.89 5.12E-12 Box Plot